« DIMACS Workshop on Optimization in Distance Geometry
June 26, 2019 - June 28, 2019
Location:
DIMACS Center
Rutgers University
CoRE Building
96 Frelinghuysen Road
Piscataway, NJ 08854
Click here for map.
Organizer(s):
Nathan Krislock, Northern Illinois University
Carlile Lavor, University of Campinas
Antonio Mucherino, University of Rennes
Distance Geometry (DG) has a rich mathematical history, rooted in Heron’s theorem for computing the area of a triangle from the lengths of its sides. DG was further developed in the 1800s and 1900s by Cayley, Maxwell, Menger, and Isaac Schoenberg, who gave, among other things, an algebraic proof of the equivalence between distance matrices and Gram matrices. The essence of Schoenberg’s proof is now used to show the validity of the well-known Multidimensional Scaling technique.
DG today is a research area bridging mathematics and computer science with applicability to practical problems in a wide range of disciplines. In the majority of DG applications, we are given an incomplete list of distances between pairs of objects, and we seek positions in Rn realizing those distances. Classical applications of DG include such topics as protein conformation determination and sensor network localization, while emerging applications range from the study of molecular nanostructure to the adaptation of human movements in simulated environments. DG is also used in important data science applications such as compressed sensing, low rank matrix completion, and visualization of high-dimensional data.
Although the natural statement of a DG problem is as a constraint satisfaction problem, most solution methods are based on formulating a DG problem as an optimization problem. Depending on the instance at hand, either a continuous formulation as a semidefinite program or a combinatorial formulation might be preferred. Thus, DG applications reap benefits from progress in both the continuous and discrete domains.
This workshop will: 1) highlight important optimization challenges in distance geometry; 2) draw connections to closely related problems in graph rigidity, semidefinite programming, and matrix completion, among others; 3) investigate complementary continuous and discrete approaches to distance geometry, with the aim of developing new efficient hybrid methods; and 4) involve researchers who are applying DG to in a wide range of fields. While solution methods for DG problems are mainly developed by researchers in mathematics, computer science, and operations research, novel applications emerge from a myriad of fields, such as biology, chemistry, materials science, engineering, robotics, and data and information sciences.
The workshop will include four tutorial presentations to foster interdisciplinary engagement. One will be a general overview of DG that is mostly aimed at students and other newcomers, and another will highlight on emerging applications of the distance geometry, such as, for example, nanostructure problems in materials science. This workshop builds on the 2016 DIMACS Workshop on Distance Geometry: Theory and Applications.
View the call for papers for the associated special issue of the Journal of Global Optimization.
Wednesday, June 26, 2019
Registration and Breakfast
Welcome
Nathan Krislock, Northern Illinois University
Carlile Lavor, University of Campinas
Antonio Mucherino, University of Rennes
On Euclidean Distance Matrices and Spherical Configurations (tutorial)
Abdo Alfakih, University of Windsor
Break
A Matrix Completion Framework for the Euclidean Distance Geometry Problem
Abiy Tasissa, Rensselaer Polytechnic Institute (RPI)
Andres David Baez-Sanchez, Federal University of Technology – Paraná
Lunch
Distance Geometry in Data Science (tutorial)
Leo Liberti, CNRS and Ecole Polytechnique
Break
Completions for Special Classes of Matrices: Euclidean Distance, Low Rank, Sparse, and Toeplitz
Henry Wolkowicz, University of Waterloo
Time-Varying Semidefinite Programs
Amir Ali Ahmadi, Princeton University
Clique-Based Semidefinite Relaxation of the Quadratic Assignment Problem
Yuehaw Khoo, Stanford University
Thursday, June 27, 2019
Registration and Breakfast
Unassigned Distance Geometry, Graph Rigidity and the Nanostructure Problem (tutorial)
Phillip Duxbury, Michigan State University
Break
Jung-Hsin Lin, Academia Sinica
Advances and New Challenges on Branch-and-Prune Algorithm
Michael Souza, Federal University of Ceará
Lunch
Discretization of Distance Geometry Graphs: Algorithmic Complexity and Solution Methods
Jeremy Omer, INSA Rennes
Mixed Integer Nonlinear Optimization Models for the Euclidean Steiner Tree Problem in R^d
Nelson Maculan, Federal University of Rio de Janeiro
Break
Autocorrelation Analysis in Cryo-Electron Microscopy
Amit Singer, Princeton University
An Autocorrelation View of the Unassigned Distance Geometry Problem
Shuai Huang, University of Illinois, Urbana-Champaign
Solving the Unassigned Distance Geometry Problem via Nonlinear Programming
Luiz Salles-Neto, Federal University of Sao Paolo
Dinner at Panico's
Friday, June 28, 2019
Registration and Breakfast
Structure in Motion (tutorial)
Ileana Streinu, Smith College
Break
Global Rigidity of Linearly Constrained Frameworks
Anthony Nixon, Lancaster University
Towards Multimodal Indoor Localization
Frederike Dümbgen, EPFL
Lunch
Distance Coloring Graph Problems: Theoretical Models, Methods, and Applications
Rosiane Freitas, Federal University of Amazonas
Phase Unwrapping and Operations Research
Thibaut Vidal, Pontifical Catholic University of Rio de Janeiro
Closing
Presentation at the workshop is by invitation. Attendance at the workshop is open to all interested participants (subject to space limitations). Please register if you would like to attend this workshop.
There will be a special issue of the Journal of Global Optimization associated with the workshop and accepting papers on appropriate topics related to distance geometry. The special issue will be edited by Andres David Baez (Federal University of Technology, Paraná, Brazil), together with workshop organizers Carlile Lavor and Antonio Mucherino. Deadline for submissions is December 31, 2019. View the call for papers.
Please note that June 26 and June 28, the workshop will be held in the CoRE Building Lecture Hall (Room 101). On June 27, the workshop will be held in the Hill Center, Room 116. Parking is the same location for both venues. This map shows the location of both buildings and parking.
Important Information about Parking: Workshop attendees must use the below link to register their vehicle for the event. Until this process is completed your vehicle is not registered and you may receive a citation. Faculty, Staff, and Students must park only in lots they are authorized to park in. Workshop attendees may also park in Lots 64, 60A & 60B without permits.
Presented in association with the Special Focus on Bridging Continuous and Discrete Optimization.
Please click here to get information for travel and accomodations information for this event.